PhD in Computer Science
University of Kiel, 2001
Article
Article
Article
Article
Article
Article
ECL 3.0: a sensitive peptide identification tool for cross-linking mass spectrometry data analysis
Article
Exhaustive Cross-Linking Search with Protein Feedback
Article
Article
Combining Tags of Various Lengths Benefits Peptide Identification in Bottom-up Proteomics
Conference paper
Article
Article
Article
Data imbalance in CRISPR off-target prediction
Article
Xolik: Finding Cross-linked Peptides With Maximum Paired Scores in Linear Time
Article
Conference paper
Region-Based Interaction Detection in Genome-Wide Case-Control Studies
Conference paper
Article
Development of in planta chemical cross-linking-based quantitative interactomics in Arabidopsis
Article
Establishment of Dimethyl Labelling-based Quantitative Acetylproteomics in Arabidopsis
Article
Article
Low-Rank Adaptive Clutter Filtering for Robust Ultrasound Vector Flow Imaging
Conference paper
Article
Article
Exhaustively Identifying Cross-linked Peptides with a Linear Computational Complexity
Article
FPGA Implementation of the Coupled Filtering Method and the Affine Warping Method
Article
Article
Conference paper
Conference paper
ECL 2.0: Exhaustively Identifying Cross-Linked Peptides with a Linear Computational Complexity
Conference paper
FPGA Implementation of the Coupled Filtering Method
Conference paper
Conference paper
Conference paper
Conference paper
PIPI: PTM-Invariant Peptide Identification Using Coding Method
Conference paper
ECL: An Exhaustive Search Tool for the Identification of Cross-linked Peptides Using Whole Database
Article
Article
PIPI: PTM-Invariant Peptide Identification Using Coding Method
Article
Conference paper
Low-Rank Modeling and Its Applications in Image Analysis
Article
PBOOST: a GPU-based tool for parallel permutation tests in genome-wide association studies
Article
Piecewise-constant and low-rank approximation for identification of recurrent copy number variations
Article
A Combinatorial Perspective of the Protein Inference Problem
Article
Bioinformatic Analysis of Data Generated from MALDI Mass Spectrometry for Biomarker Discovery
Article
Article
Moving Object Detection by Detecting Contiguous Outliers in the Low-Rank Representation
Article
Multisample aCGH Data Analysis via Total Variation and Spectral Regularization
Article
On Feature Motion Decorrelation in Ultrasound Speckle Tracking
Article
The Complete Compositional Epistasis Detection in Genome-wide Association Studies
Article
Ultrasound Bio-Microscopic Image Segmentation for Evaluation of Zebrafish Cardiac Function
Article
Article
Active Contours with Group Similarity
Conference paper
Low-rank Modeling and its Applications in Medical Image Analysis
Conference paper
Article
Peptide Reranking with Protein-Peptide Correspondence and Precursor Peak Intensity Information
Article
Article
Conference paper
A Hidden Two-locus Disease Association Pattern in Genome-wide Association Studies
Article
A Partial Set Covering Model for Protein Mixture Identification Using Mass Spectrometry Data
Article
GBOOST: a GPU-based Tool for Detecting Gene-gene Interactions in Genome-wide Case Control Studies
Article
Identifying Disease-associated SNP Clusters via Contiguous Outlier Detection
Article
Motif-All: Discovering All Phosphorylation Motifs
Article
Score regularization for peptide identification
Article
A brief review of signal processing issues in mass spectrometry-based proteomics studies
Conference paper
Conference paper
A Recombination Hotspot in a Schizophrenia-Associated Region of GABRB2
Article
A Regularized Method for Peptide Quantification
Article
BOOST: A Fast Approach to Detecting Gene-Gene Interactions in Genome-wide Case-Control Studies
Article
Detecting Two-locus Associations Allowing for Interactions in Genome-wide Association Studies
Article
Optimization-Based Peptide Mass Fingerprinting for Protein Mixture Identification
Article
Predictive Rule Inference for Epistatic Interaction Detection in Genome-wide Association Studies
Article
Stable feature selection for biomarker discovery
Article
Book
A coupled filtering method to solve feature-motion decorrelation in speckle tracking
Conference paper
A Regularized Regression Method for Peptide Quantification
Conference paper
Accurate segmentation of ultrasound images using the motion cue
Conference paper
Conference paper
Motif-All: Discovering All Phosphorylation Motifs
Conference paper
Score Regularization for Peptide Identification
Conference paper
Solving the Feature-Motion Decorrelation Problem in Ultrasound Speckle Tracking
Conference paper
SyncPro: A synchronized visualization tool for differential analysis of proteomics data sets
Conference paper
Comparison of public peak detection algorithms for MALDI mass spectrometry data analysis
Article
Improving peptide identification with single-stage mass spectrum peaks
Article
Article
Semi-supervised protein subcellular localization
Article
Article
On ACO-based fuzzy clustering for image segmentation
Conference paper
Optimization-based Peptide Mass Fingerprinting for Protein Mixture Identification
Conference paper
Bayesian mass spectra peak alignment from mass charge ratios
Article
Improving mass spectrometry peak detection using multiple peak alignment results
Article
Is SubcellularLocalization Informative for Modeling Protein-protein Interaction Signal?
Article
Peak bagging for peptide mass fingerprinting
Article
A new protocol of analyzing isotope-coded affinity tag data from high-resolution LC-MS spectrometry
Article
A New Protocol of Analyzing Isotope Coded Affinity Tag Data from High Resolution LC-MS Spectrometry
Conference paper
Improving Mass Spectrometry Peak Detection Using Multiple Peak Alignment Results
Conference paper
Bayesian Mass Spectra Peak Alignment from Mass Charge Ratios
Article
Detecting and aligning peaks in mass spectrometry data with applications to MALDI
Article
MALDI-MS data analysis for disease biomarker discovery.
Article
Multiple peak alignment in sequential data analysis: A scale-space-based approach
Article
Article
Statistical Methods In Proteomics
Book chapter
Using skew Gabor filter in source signal separation and local spectral orientation analysis
Article
Echocardiographic Image Analysis
Book chapter
Aligning peaks across multiple mass spectrometry data sets using a scale-space based approach
Conference paper
Pointwise Motion Tracking in Echocardiographic Images
Conference paper
The choice of tracking features in ultrasound-based strain imaging analysis
Conference paper
Using Skew Gabor Filter in Source Signal Separation and Local Spectral Multi-Orientation Analysis
Conference paper
Combinative multi-scale level set framework for echocardiographic image segmentation
Article
Motion analysis of 3D ultrasound texture patterns
Article
Multiple motion analysis: In spatial or in spectral domain?
Article
Three dimensional orientation signatures with conic kernel filtering for multiple motion analysis
Article
Motion Analysis of 3D Ultrasound Texture Patterns.
Conference paper
Oriented structure of the occlusion distortion: Is it reliable?
Article
Combinative Multi-Scale Level Set Framework for Echocardiographic Image Segmentation
Conference paper
Approximate Orientation Steerability Based on Angular Gaussians
Article
3D-orientation signatures with conic kernel filtering for multiple motion analysis
Conference paper
A New 3D Orientation Steerable Filter
Conference paper
Skewness of Gabor Wavelets and Source Signal Separation
Conference paper
Eliminating Outliers in Motion Occlusion Analysis
Conference paper
Detection and characterization of multiple motion points
Article
Junction Characterization Using Polar Pyramid
Conference paper
Low-cost junction characterization using polar averaging filters
Conference paper
Rotated wedge averaging method for junction characterization
Conference paper
Exhaustively Identifying Cross-linked Peptides with a Linear Computational Complexity
FPGA Implementation of the Coupled Filtering Method and the Affine Warping Method
A Combinatorial Perspective of the Protein Inference Problem
Bioinformatic Analysis of Data Generated from MALDI Mass Spectrometry for Biomarker Discovery
Moving Object Detection by Detecting Contiguous Outliers in the Low-Rank Representation
Multisample aCGH Data Analysis via Total Variation and Spectral Regularization
On Feature Motion Decorrelation in Ultrasound Speckle Tracking
The Complete Compositional Epistasis Detection in Genome-wide Association Studies
Ultrasound Bio-Microscopic Image Segmentation for Evaluation of Zebrafish Cardiac Function
A Hidden Two-locus Disease Association Pattern in Genome-wide Association Studies
A Partial Set Covering Model for Protein Mixture Identification Using Mass Spectrometry Data
GBOOST: a GPU-based Tool for Detecting Gene-gene Interactions in Genome-wide Case Control Studies
Identifying Disease-associated SNP Clusters via Contiguous Outlier Detection
A Recombination Hotspot in a Schizophrenia-Associated Region of GABRB2
BOOST: A Fast Approach to Detecting Gene-Gene Interactions in Genome-wide Case-Control Studies
Detecting Two-locus Associations Allowing for Interactions in Genome-wide Association Studies
Optimization-Based Peptide Mass Fingerprinting for Protein Mixture Identification
Predictive Rule Inference for Epistatic Interaction Detection in Genome-wide Association Studies
A coupled filtering method to solve feature-motion decorrelation in speckle tracking
Accurate segmentation of ultrasound images using the motion cue
Solving the Feature-Motion Decorrelation Problem in Ultrasound Speckle Tracking
SyncPro: A synchronized visualization tool for differential analysis of proteomics data sets
Bayesian Mass Spectra Peak Alignment from Mass Charge Ratios
Detecting and aligning peaks in mass spectrometry data with applications to MALDI
Multiple peak alignment in sequential data analysis: A scale-space-based approach
Using skew Gabor filter in source signal separation and local spectral orientation analysis
Combinative multi-scale level set framework for echocardiographic image segmentation
Three dimensional orientation signatures with conic kernel filtering for multiple motion analysis
Article
Development of in planta chemical cross-linking-based quantitative interactomics in Arabidopsis
Article
Establishment of Dimethyl Labelling-based Quantitative Acetylproteomics in Arabidopsis
Article
Article
Low-Rank Adaptive Clutter Filtering for Robust Ultrasound Vector Flow Imaging
Conference paper
Article
Article
Exhaustively Identifying Cross-linked Peptides with a Linear Computational Complexity
Article
FPGA Implementation of the Coupled Filtering Method and the Affine Warping Method
Article
Article
Conference paper
Conference paper
ECL 2.0: Exhaustively Identifying Cross-Linked Peptides with a Linear Computational Complexity
Conference paper
FPGA Implementation of the Coupled Filtering Method
Conference paper
Conference paper
Conference paper
Conference paper
PIPI: PTM-Invariant Peptide Identification Using Coding Method
Conference paper
ECL: An Exhaustive Search Tool for the Identification of Cross-linked Peptides Using Whole Database
Article
Article
PIPI: PTM-Invariant Peptide Identification Using Coding Method
Article
Conference paper
Low-Rank Modeling and Its Applications in Image Analysis
Article
PBOOST: a GPU-based tool for parallel permutation tests in genome-wide association studies
Article
Piecewise-constant and low-rank approximation for identification of recurrent copy number variations
Article
A Combinatorial Perspective of the Protein Inference Problem
Article
Bioinformatic Analysis of Data Generated from MALDI Mass Spectrometry for Biomarker Discovery
Article
Article
Moving Object Detection by Detecting Contiguous Outliers in the Low-Rank Representation
Article
Multisample aCGH Data Analysis via Total Variation and Spectral Regularization
Article
On Feature Motion Decorrelation in Ultrasound Speckle Tracking
Article
The Complete Compositional Epistasis Detection in Genome-wide Association Studies
Article
Ultrasound Bio-Microscopic Image Segmentation for Evaluation of Zebrafish Cardiac Function
Article
Article
Active Contours with Group Similarity
Conference paper
Low-rank Modeling and its Applications in Medical Image Analysis
Conference paper
Article
Peptide Reranking with Protein-Peptide Correspondence and Precursor Peak Intensity Information
Article
Article
Conference paper
A Hidden Two-locus Disease Association Pattern in Genome-wide Association Studies
Article
A Partial Set Covering Model for Protein Mixture Identification Using Mass Spectrometry Data
Article
GBOOST: a GPU-based Tool for Detecting Gene-gene Interactions in Genome-wide Case Control Studies
Article
Identifying Disease-associated SNP Clusters via Contiguous Outlier Detection
Article
Motif-All: Discovering All Phosphorylation Motifs
Article
Score regularization for peptide identification
Article
A brief review of signal processing issues in mass spectrometry-based proteomics studies
Conference paper
Conference paper
A Recombination Hotspot in a Schizophrenia-Associated Region of GABRB2
Article
A Regularized Method for Peptide Quantification
Article
BOOST: A Fast Approach to Detecting Gene-Gene Interactions in Genome-wide Case-Control Studies
Article
Detecting Two-locus Associations Allowing for Interactions in Genome-wide Association Studies
Article
Optimization-Based Peptide Mass Fingerprinting for Protein Mixture Identification
Article
Predictive Rule Inference for Epistatic Interaction Detection in Genome-wide Association Studies
Article
Stable feature selection for biomarker discovery
Article
Book
A coupled filtering method to solve feature-motion decorrelation in speckle tracking
Conference paper
A Regularized Regression Method for Peptide Quantification
Conference paper
Accurate segmentation of ultrasound images using the motion cue
Conference paper
Conference paper
Motif-All: Discovering All Phosphorylation Motifs
Conference paper
Score Regularization for Peptide Identification
Conference paper
Solving the Feature-Motion Decorrelation Problem in Ultrasound Speckle Tracking
Conference paper
SyncPro: A synchronized visualization tool for differential analysis of proteomics data sets
Conference paper
Comparison of public peak detection algorithms for MALDI mass spectrometry data analysis
Article
Improving peptide identification with single-stage mass spectrum peaks
Article
Article
Semi-supervised protein subcellular localization
Article
Article
On ACO-based fuzzy clustering for image segmentation
Conference paper
Optimization-based Peptide Mass Fingerprinting for Protein Mixture Identification
Conference paper
Bayesian mass spectra peak alignment from mass charge ratios
Article
Improving mass spectrometry peak detection using multiple peak alignment results
Article
Is SubcellularLocalization Informative for Modeling Protein-protein Interaction Signal?
Article
Peak bagging for peptide mass fingerprinting
Article
A new protocol of analyzing isotope-coded affinity tag data from high-resolution LC-MS spectrometry
Article
A New Protocol of Analyzing Isotope Coded Affinity Tag Data from High Resolution LC-MS Spectrometry
Conference paper
Improving Mass Spectrometry Peak Detection Using Multiple Peak Alignment Results
Conference paper
Bayesian Mass Spectra Peak Alignment from Mass Charge Ratios
Article
Detecting and aligning peaks in mass spectrometry data with applications to MALDI
Article
MALDI-MS data analysis for disease biomarker discovery.
Article
Multiple peak alignment in sequential data analysis: A scale-space-based approach
Article
Article
Statistical Methods In Proteomics
Book chapter
Using skew Gabor filter in source signal separation and local spectral orientation analysis
Article
Echocardiographic Image Analysis
Book chapter
Aligning peaks across multiple mass spectrometry data sets using a scale-space based approach
Conference paper
Pointwise Motion Tracking in Echocardiographic Images
Conference paper
The choice of tracking features in ultrasound-based strain imaging analysis
Conference paper
Using Skew Gabor Filter in Source Signal Separation and Local Spectral Multi-Orientation Analysis
Conference paper
Combinative multi-scale level set framework for echocardiographic image segmentation
Article
Motion analysis of 3D ultrasound texture patterns
Article
Multiple motion analysis: In spatial or in spectral domain?
Article
Three dimensional orientation signatures with conic kernel filtering for multiple motion analysis
Article
Motion Analysis of 3D Ultrasound Texture Patterns.
Conference paper
Oriented structure of the occlusion distortion: Is it reliable?
Article
Combinative Multi-Scale Level Set Framework for Echocardiographic Image Segmentation
Conference paper
Approximate Orientation Steerability Based on Angular Gaussians
Article
3D-orientation signatures with conic kernel filtering for multiple motion analysis
Conference paper
A New 3D Orientation Steerable Filter
Conference paper
Skewness of Gabor Wavelets and Source Signal Separation
Conference paper
Eliminating Outliers in Motion Occlusion Analysis
Conference paper
Detection and characterization of multiple motion points
Article
Junction Characterization Using Polar Pyramid
Conference paper
Low-cost junction characterization using polar averaging filters
Conference paper
Rotated wedge averaging method for junction characterization
Conference paper
ELEC2910 | Academic and Professional Development I |
ELEC4820 | Medical Imaging |
CPEG4911 | Computer Engineering Final Year Project in ELEC |
EESM5547 | Multimedia Signal Processing |
ELEC4900 | Final Year Design Project |
ELEC5810 | Introduction to Bioinformatics Algorithms |
EESM5780 | Diagnostic Medical Imaging |
ELEC4820 | Medical Imaging |
No Teaching Assignments |
No Teaching Assignments |
No Teaching Assignments |
BIAN, Yuqian
Electronic and Computer Engineering
HAO, Jingyu
Electronic and Computer Engineering
REN, Jia
(co-supervision)
Individualized Interdisciplinary Program (Bioscience and Biomedical Engineering)
WU, Junjie
(co-supervision)
Individualized Interdisciplinary Program (Artificial Intelligence)
ZHAO, Peize
Individualized Interdisciplinary Program (Bioscience and Biomedical Engineering)
LAI, Shengzhi
Electronic and Computer Engineering
LI, Chenrui
Electronic and Computer Engineering
ZHANG, Xuechen
Electronic and Computer Engineering
ZHAO, Juntao
Electronic and Computer Engineering
ZHENG, Jingwen
Electronic and Computer Engineering
HE, Wuxian
Electronic and Computer Engineering
ZHOU, Chen
Electronic and Computer Engineering( Completed in 2024 )
DAI, Shuaijian
(co-supervision)
Bioengineering( Completed in 2022 )
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