Faculty Profiles - SUN Meredith Dan | The Hong Kong University of Science and Technology

Meredith Dan SUN
孫丹

PhD in Bioinformatics
Georgia Institute of Technology, 2019

Lecturer II
Division of Life Science

(852) 2358 8403
sund@ust.hk
Room 5469

Google Scholar

dOXPfTwAAAAJ

ORCID

0000-0003-2147-9308

Scopus ID

57201199794

Research Interest Publications Teaching Assignment

Research Interest

Evolutionary biology
Immunology
Bioinformatics
Epigenetics

Publications

All Years 18 2025 0 2024 4 2023 3 2022 3 2021 2 2020 1 2019 5

2024 4

High-dimensional single-cell analysis of human natural killer cell heterogeneity

Nature Immunology, v. 25, (8), August 2024, p. 1474-1488
Rebuffet, Lucas; Sun, Dan; Vivier, Eric
Article

Tissue-specific nonheritable influences drive endometrial immune system variation

Science Immunology, v. 9, (94), April 2024, article number eadj7168
Bister, Jonna; Filipovic, Iva; Sun, Dan; Crona-Guterstam, Ylva; Cornillet, Martin; Ponzetta, Andrea; Michaëlsson, Jakob; Gidlöf, Sebastian; Ivarsson, Martin A.; Strunz, Benedikt; Björkström, Niklas K.
Article

Tumor stage-driven disruption of NK cell maturation in human and murine tumors

iScience, v. 27, (11), November 2024, article number 111233
Russick, Jules; Torset, Carine; Sun, Dan; Marmier, Solenne; Merle, Nicolas; Voilin, Elodie; Josseaume, Nathalie; Meylan, Maxime; Hernandez, Isaïas; Foy, Pierre-Emmanuel; Joubert, Pierre-Emmanuel; Alifano, Marco; Lupo, Audrey; Siberil, Sophie; Björkström, Niklas K.; Damotte, Diane; Cremer, Isabelle
Article

Type I Interferon Autoantibodies Correlate With Cellular Immune Alterations in Severe COVID-19

The Journal of Infectious Diseases, v. 230, (2), August 2024, p. e318-e326
Strunz, Benedikt; Sun, Dan; Björkström, Niklas K.
Article

2023 3

Phenotypic diversity of human adipose tissue-resident NK cells in obesity

Frontiers in Immunology, v. 14, February 2023, article number 1130370
Haugstøyl, Martha E.; Cornillet, Martin; Strand, Kristina; Stiglund, Natalie; Sun, Dan; Lawrence-Archer, Laurence; Hjellestad, Iren D.; Busch, Christian; Mellgren, Gunnar; Björkström, Niklas K.; Fernø, Johan
Article

Preoperative immunological plasma markers TRAIL, CSF1 and TIE2 predict survival after resection for biliary tract cancer

Frontiers in Oncology, v. 13, September 2023, article number 1169537
Jansson, Hannes; Cornillet, Martin; Sun, Dan; Filipovic, Iva; Sturesson, Christian; O’Rourke, Colm J.; Andersen, Jesper B.; Björkström, Niklas K.; Sparrelid, Ernesto
Article

Treatment cessation in HBeAg-negative chronic hepatitis B: clinical response is associated with increase in specific proinflammatory cytokines

Scientific Reports, v. 13, (1), December 2023, article number 22590
Holmberg, Marte; Aass, Hans Christian D.; Dalgard, Olav; Samuelsen, Ellen; Sun, Dan; Björkström, Niklas K.; Johannessen, Asgeir; Reikvam, Dag Henrik
Article

2022 3

Distinct T cell subsets in adipose tissue are associated with obesity

European Journal of Immunology, v. 53, (2), November 2022, article number 2249990
Haugstøyl, Martha E.; Cornillet, Martin; Strand, Kristina; Stiglund, Natalie; Sun, Dan; Lawrence-Archer, Laurence; Hjellestad, Iren D.; Sparrelid, Ernesto; Busch, Christian; Hjelmesæth, Jøran; Hertel, Jens K.; Ponzetta, Andrea; Mellgren, Gunnar; Fernø, Johan; Björkström, Niklas K.
Article

Dynamic molecular evolution of a supergene with suppressed recombination in white-throated sparrows

eLife, v. 11, August 2022, article number e79387
Jeong, Hyeonsoo; Baran, Nicole M.; Sun, Dan; Chatterjee, Paramita; Layman, Thomas S.; Balakrishnan, Christopher N.; Maney, Donna L.; Yi, Soojin V.
Article

Mucosal-associated invariant T-cell tumor infiltration predicts long-term survival in cholangiocarcinoma

Hepatology, v. 75, (5), May 2022, p. 1154-1168
Zimmer, Christine L.; Filipovic, Iva; Cornillet, Martin; O’Rourke, Colm J.; Berglin, Lena; Jansson, Hannes; Sun, Dan; Strauss, Otto; Hertwig, Laura; Johansson, Helene; von Seth, Erik; Sparrelid, Ernesto; Dias, Joana; Glaumann, Hans; Melum, Espen; Ellis, Ewa C.; Sandberg, Johan K.; Andersen, Jesper B.; Bergquist, Annika; Björkström, Niklas K.
Article

2021 2

Genome-wide variation in DNA methylation linked to developmental stage and chromosomal suppression of recombination in white-throated sparrows

Molecular Ecology, v. 30, (14), January 2021, article number mec.15793, p. 3453-3467
Sun, Dan; Layman, Thomas S.; Jeong, Hyeonsoo; Chatterjee, Paramita; Grogan, Kathleen; Merritt, Jennifer R.; Maney, Donna L.; Yi, Soojin V.
Article

Koala methylomes reveal divergent and conserved DNA methylation signatures of X chromosome regulation

Proceedings of the Royal Society B: Biological Sciences, v. 288, (1945), February 2021, article number 20202244
Singh, Devika; Sun, Dan; King, Andrew G.; Alquezar-Planas, David E.; Johnson, Rebecca N.; Alvarez-Ponce, David; Yi, Soojin V.
Article

2020 1

A supergene-linked estrogen receptor drives alternative phenotypes in a polymorphic songbird

Proceedings of the National Academy of Sciences of the United States of America, v. 117, (35), August 2020, p. 21673-21680
Merritt, Jennifer R.; Grogan, Kathleen E.; Zinzow-Kramer, Wendy M.; Sun, Dan; Ortlund, Eric A.; Yi, Soojin V.; Maney, Donna L.
Article

2019 1

Regional epigenetic differentiation of the Z Chromosome between sexes in a female heterogametic system

Genome Research, v. 29, (10), October 2019, p. 1673-1684
Sun, Dan; Maney, Donna L.; Layman, Thomas S.; Chatterjee, Paramita; Yi, Soojin V.
Article

2018 2

Comparative genomics of the miniature wasp and pest control agent Trichogramma pretiosum

BMC Biology, v. 16, (1), May 2018, article number 54
Lindsey, Amelia R.I.; Sun, Dan; Stouthamer, Richard; Werren, John H.
Article

Rapid regulatory evolution of a nonrecombining autosome linked to divergent behavioral phenotypes

Proceedings of the National Academy of Sciences of the United States of America, v. 115, (11), March 2018, p. 2794-2799
Sun, Dan; Huh, Iksoo; Zinzow-Kramer, Wendy M.; Maney, Donna L.; Yi, Soojin V.
Article

2015 1

Impacts of chromatin states and long-range genomic segments on aging and DNA methylation

PLoS ONE, v. 10, (6), June 2015, article number e0128517
Sun, Dan; Yi, Soojin V.
Article

2013 1

人耳聾相關基因GJB3的結構特征及生物信息學分析

生物技术通讯=Letters In Biotechnology, v. 24, (1), January 2013, p. 1-7
孫丹; 王帥; 魏欽俊; 姚俊; 曹新
Article

Article 4

High-dimensional single-cell analysis of human natural killer cell heterogeneity

Nature Immunology, v. 25, (8), August 2024, p. 1474-1488
Rebuffet, Lucas; Sun, Dan; Vivier, Eric

Tissue-specific nonheritable influences drive endometrial immune system variation

Science Immunology, v. 9, (94), April 2024, article number eadj7168
Bister, Jonna; Filipovic, Iva; Sun, Dan; Crona-Guterstam, Ylva; Cornillet, Martin; Ponzetta, Andrea; Michaëlsson, Jakob; Gidlöf, Sebastian; Ivarsson, Martin A.; Strunz, Benedikt; Björkström, Niklas K.

Tumor stage-driven disruption of NK cell maturation in human and murine tumors

iScience, v. 27, (11), November 2024, article number 111233
Russick, Jules; Torset, Carine; Sun, Dan; Marmier, Solenne; Merle, Nicolas; Voilin, Elodie; Josseaume, Nathalie; Meylan, Maxime; Hernandez, Isaïas; Foy, Pierre-Emmanuel; Joubert, Pierre-Emmanuel; Alifano, Marco; Lupo, Audrey; Siberil, Sophie; Björkström, Niklas K.; Damotte, Diane; Cremer, Isabelle

Type I Interferon Autoantibodies Correlate With Cellular Immune Alterations in Severe COVID-19

The Journal of Infectious Diseases, v. 230, (2), August 2024, p. e318-e326
Strunz, Benedikt; Sun, Dan; Björkström, Niklas K.

Article 3

Phenotypic diversity of human adipose tissue-resident NK cells in obesity

Frontiers in Immunology, v. 14, February 2023, article number 1130370
Haugstøyl, Martha E.; Cornillet, Martin; Strand, Kristina; Stiglund, Natalie; Sun, Dan; Lawrence-Archer, Laurence; Hjellestad, Iren D.; Busch, Christian; Mellgren, Gunnar; Björkström, Niklas K.; Fernø, Johan

Preoperative immunological plasma markers TRAIL, CSF1 and TIE2 predict survival after resection for biliary tract cancer

Frontiers in Oncology, v. 13, September 2023, article number 1169537
Jansson, Hannes; Cornillet, Martin; Sun, Dan; Filipovic, Iva; Sturesson, Christian; O’Rourke, Colm J.; Andersen, Jesper B.; Björkström, Niklas K.; Sparrelid, Ernesto

Treatment cessation in HBeAg-negative chronic hepatitis B: clinical response is associated with increase in specific proinflammatory cytokines

Scientific Reports, v. 13, (1), December 2023, article number 22590
Holmberg, Marte; Aass, Hans Christian D.; Dalgard, Olav; Samuelsen, Ellen; Sun, Dan; Björkström, Niklas K.; Johannessen, Asgeir; Reikvam, Dag Henrik

Article 3

Distinct T cell subsets in adipose tissue are associated with obesity

European Journal of Immunology, v. 53, (2), November 2022, article number 2249990
Haugstøyl, Martha E.; Cornillet, Martin; Strand, Kristina; Stiglund, Natalie; Sun, Dan; Lawrence-Archer, Laurence; Hjellestad, Iren D.; Sparrelid, Ernesto; Busch, Christian; Hjelmesæth, Jøran; Hertel, Jens K.; Ponzetta, Andrea; Mellgren, Gunnar; Fernø, Johan; Björkström, Niklas K.

Dynamic molecular evolution of a supergene with suppressed recombination in white-throated sparrows

eLife, v. 11, August 2022, article number e79387
Jeong, Hyeonsoo; Baran, Nicole M.; Sun, Dan; Chatterjee, Paramita; Layman, Thomas S.; Balakrishnan, Christopher N.; Maney, Donna L.; Yi, Soojin V.

Mucosal-associated invariant T-cell tumor infiltration predicts long-term survival in cholangiocarcinoma

Hepatology, v. 75, (5), May 2022, p. 1154-1168
Zimmer, Christine L.; Filipovic, Iva; Cornillet, Martin; O’Rourke, Colm J.; Berglin, Lena; Jansson, Hannes; Sun, Dan; Strauss, Otto; Hertwig, Laura; Johansson, Helene; von Seth, Erik; Sparrelid, Ernesto; Dias, Joana; Glaumann, Hans; Melum, Espen; Ellis, Ewa C.; Sandberg, Johan K.; Andersen, Jesper B.; Bergquist, Annika; Björkström, Niklas K.

Article 2

Genome-wide variation in DNA methylation linked to developmental stage and chromosomal suppression of recombination in white-throated sparrows

Molecular Ecology, v. 30, (14), January 2021, article number mec.15793, p. 3453-3467
Sun, Dan; Layman, Thomas S.; Jeong, Hyeonsoo; Chatterjee, Paramita; Grogan, Kathleen; Merritt, Jennifer R.; Maney, Donna L.; Yi, Soojin V.

Koala methylomes reveal divergent and conserved DNA methylation signatures of X chromosome regulation

Proceedings of the Royal Society B: Biological Sciences, v. 288, (1945), February 2021, article number 20202244
Singh, Devika; Sun, Dan; King, Andrew G.; Alquezar-Planas, David E.; Johnson, Rebecca N.; Alvarez-Ponce, David; Yi, Soojin V.

Article 1

A supergene-linked estrogen receptor drives alternative phenotypes in a polymorphic songbird

Proceedings of the National Academy of Sciences of the United States of America, v. 117, (35), August 2020, p. 21673-21680
Merritt, Jennifer R.; Grogan, Kathleen E.; Zinzow-Kramer, Wendy M.; Sun, Dan; Ortlund, Eric A.; Yi, Soojin V.; Maney, Donna L.

Article 1

Regional epigenetic differentiation of the Z Chromosome between sexes in a female heterogametic system

Genome Research, v. 29, (10), October 2019, p. 1673-1684
Sun, Dan; Maney, Donna L.; Layman, Thomas S.; Chatterjee, Paramita; Yi, Soojin V.

Article 2

Comparative genomics of the miniature wasp and pest control agent Trichogramma pretiosum

BMC Biology, v. 16, (1), May 2018, article number 54
Lindsey, Amelia R.I.; Sun, Dan; Stouthamer, Richard; Werren, John H.

Rapid regulatory evolution of a nonrecombining autosome linked to divergent behavioral phenotypes

Proceedings of the National Academy of Sciences of the United States of America, v. 115, (11), March 2018, p. 2794-2799
Sun, Dan; Huh, Iksoo; Zinzow-Kramer, Wendy M.; Maney, Donna L.; Yi, Soojin V.

Article 1

Impacts of chromatin states and long-range genomic segments on aging and DNA methylation

PLoS ONE, v. 10, (6), June 2015, article number e0128517
Sun, Dan; Yi, Soojin V.

Article 1

人耳聾相關基因GJB3的結構特征及生物信息學分析

生物技术通讯=Letters In Biotechnology, v. 24, (1), January 2013, p. 1-7
孫丹; 王帥; 魏欽俊; 姚俊; 曹新

2019 1

Regional epigenetic differentiation of the Z Chromosome between sexes in a female heterogametic system

Genome Research, v. 29, (10), October 2019, p. 1673-1684
Sun, Dan; Maney, Donna L.; Layman, Thomas S.; Chatterjee, Paramita; Yi, Soojin V.
Article

2018 2

Comparative genomics of the miniature wasp and pest control agent Trichogramma pretiosum

BMC Biology, v. 16, (1), May 2018, article number 54
Lindsey, Amelia R.I.; Sun, Dan; Stouthamer, Richard; Werren, John H.
Article

Rapid regulatory evolution of a nonrecombining autosome linked to divergent behavioral phenotypes

Proceedings of the National Academy of Sciences of the United States of America, v. 115, (11), March 2018, p. 2794-2799
Sun, Dan; Huh, Iksoo; Zinzow-Kramer, Wendy M.; Maney, Donna L.; Yi, Soojin V.
Article

2015 1

Impacts of chromatin states and long-range genomic segments on aging and DNA methylation

PLoS ONE, v. 10, (6), June 2015, article number e0128517
Sun, Dan; Yi, Soojin V.
Article

2013 1

人耳聾相關基因GJB3的結構特征及生物信息學分析

生物技术通讯=Letters In Biotechnology, v. 24, (1), January 2013, p. 1-7
孫丹; 王帥; 魏欽俊; 姚俊; 曹新
Article

No Publications

Teaching Assignment

2024-25 Spring 1 2024-25 Winter 0 2024-25 Fall 0 2023-24 Summer 0 2023-24 Spring 0 2023-24 Winter 0

LIFS3150

Biostatistics

No Teaching Assignments

Research Interest

Publications

2024 4

2023 3

2022 3

2021 2

2020 1

2019 1

2018 2

2015 1

2013 1

Article 4

Article 3

Article 3

Article 2

Article 1

Article 1

Article 2

Article 1

Article 1

2019 1

2018 2

2015 1

2013 1

Teaching Assignment

Projects

From January 2023 to December 2025

Your browser is out of date!