Doctor of Natural Science in Operational Research and Cybernetics
University of the Chinese Academy of Sciences, 2011
Article
Article
Article
Article
Reference-Based OCT Angiogram Super-Resolution With Learnable Texture Generation
Article
Article
Article
Adaptive DNA amplification of synthetic gene circuit opens a way to overcome cancer chemoresistance
Article
Article
Article
Article
Identifying predictors of glioma evolution from longitudinal sequencing
Article
Article
Article
Article
Somatic GJA4 mutation in intracranial extra-axial cavernous hemangiomas
Article
Tumor-associated monocytes promote mesenchymal transformation through EGFR signaling in glioma
Article
Was Wuhan the early epicenter of the COVID-19 pandemic?—A critique
Article
Article
Article
Article
Article
Article
Article
Clinical practice guidelines for the management of adult diffuse gliomas
Article
CNAPE: A Machine Learning Method for Copy Number Alteration Prediction from Gene Expression
Article
Article
DeepDRK: A Deep Learning Framework for Drug Repurposing through Kernel-Based Multi-Omics Integration
Article
Article
Article
Article
Article
Patient-Derived Nasopharyngeal Cancer Organoids for Disease Modeling and Radiation Dose Optimization
Article
Somatic MAP3K3 mutation defines a subclass of cerebral cavernous malformation
Article
Germline and Somatic Mutations in Pediatric Germ Cell Tumors
Conference paper
Article
CELLO: a longitudinal data analysis toolbox untangling cancer evolution
Article
Article
Article
MGMT Genomic Rearrangements Contribute to Chemotherapy Resistance in Gliomas
Article
Mutations in the RNA Splicing Factor SF3B1 Promote Tumorigenesis through MYC Stabilization
Article
Article
Structural Basis for the High-Affinity Interaction between CASK and Mint1
Article
A Mini-review on Spatiotemporal Evolution of Glioma Under Treatment
Article
Article
Deciphering Brain Complexity Using Single-cell Sequencing
Article
Article
Genomic and transcriptional heterogeneity of multifocal hepatocellular carcinoma
Article
Article
Repurposing dasatinib for diffuse large B cell lymphoma
Article
Article
Article
GeneCT: a generalizable cancerous status and tissue origin classifier for pan-cancer biopsies
Article
Genetic landscape of ultra-stable chronic lymphocytic leukemia patients
Article
Article
Mutational Landscape of Secondary Glioblastoma Guides MET-Targeted Trial in Brain Tumor
Article
Pharmacogenomic landscape of patient-derived tumor cells informs precision oncology therapy
Article
Article
Article
Article
Repurposing Dasatinib for Ibrutinib-Resistant Diffuse Large B-Cell Lymphoma
Article
RNA Exosome Complex-Mediated Control of Redox Status in Pluripotent Stem Cells
Article
Spatiotemporal Genomic Architecture Informs Precision Oncology in Glioblastoma
Article
Clonal evolution of glioblastoma under therapy
Article
Article
Article
Article
Network Propagation Reveals Novel Features Predicting Drug Response of Cancer Cell Lines
Article
Network stratification analysis for identifying function-specific network layers
Article
Article
Article
RNA exosome-regulated long non-coding RNA transcription controls super-enhancer activity
Article
Transcriptomics identify CD9 as a marker of murine IL10-competent regulatory B cells
Article
Clinical Impact of Small TP53 Mutated Subclones in Chronic Lymphocytic Leukemia
Article
Noncoding RNA Transcription Targets AID to Divergently Transcribed Loci in B Cells
Article
PU.1 is essential for MLL leukemia partially via crosstalk with the MEIS/HOX pathway
Article
Tumor evolutionary directed graphs and the history of chronic lymphocytic leukemia
Article
Article
Article
E3-ubiquitin Ligase Nedd4 Determines the Fate of AID-associated RNA Polymerase II in B cells
Article
Genetic Lesions Associated with Chronic Lymphocytic Leukemia Transformation to Richter Syndrome
Article
NOA: A cytoscape plugin for network ontology analysis
Article
Whole-exome Sequencing Reveals Recurrent Somatic Mutation Networks In Cancer
Article
A unified computational model for revealing and predicting subtle subtypes of cancers
Article
Inferring a protein interaction map of Mycobacterium tuberculosis based on sequences and interologs
Article
Rewiring drug-activated p53-regulatory network from suppressing to promoting tumorigenesis
Article
Article
Conference paper
Network screening of Goto-Kakizaki rat liver microarray data during diabetic progression
Article
NOA: a novel Network Ontology Analysis method
Article
A Regularized Optimization Model for Community Identification in Complex Networks
Conference paper
A SVC-based Method to Detect Multi-scalar Noisy Communities in Complex Networks
Conference paper
Multiple Resolution Community Structure Analysis
Conference paper
Sequence-based protein-protein interaction prediction via support vector machine
Article
Uncover the Transient Transcriptional Regulations by a Novel Sliding Window Correlation Strategy
Conference paper
Disease-Aging Network Reveals Significant Roles of Aging Genes in Connecting Genetic Diseases
Article
Modularity optimization in community detection of complex networks
Article
A Constrained Optimization Method for Community Detection
Conference paper
Align Protein Surface Structures to Identify Evolutionally and Structurally Conserved Residues
Conference paper
Analysis of Transcriptome of Rice Anther
Conference paper
Gene Prioritization for Type 2 Diabetes in Tissue-specific Protein Interaction Networks
Conference paper
Recognition of Structure Similarities in Proteins
Article
Remarks on network community properties
Article
Adaptive DNA amplification of synthetic gene circuit opens a way to overcome cancer chemoresistance
Identifying predictors of glioma evolution from longitudinal sequencing
Somatic GJA4 mutation in intracranial extra-axial cavernous hemangiomas
Tumor-associated monocytes promote mesenchymal transformation through EGFR signaling in glioma
Was Wuhan the early epicenter of the COVID-19 pandemic?—A critique
Clinical practice guidelines for the management of adult diffuse gliomas
CNAPE: A Machine Learning Method for Copy Number Alteration Prediction from Gene Expression
DeepDRK: A Deep Learning Framework for Drug Repurposing through Kernel-Based Multi-Omics Integration
Patient-Derived Nasopharyngeal Cancer Organoids for Disease Modeling and Radiation Dose Optimization
Somatic MAP3K3 mutation defines a subclass of cerebral cavernous malformation
Germline and Somatic Mutations in Pediatric Germ Cell Tumors
CELLO: a longitudinal data analysis toolbox untangling cancer evolution
MGMT Genomic Rearrangements Contribute to Chemotherapy Resistance in Gliomas
Mutations in the RNA Splicing Factor SF3B1 Promote Tumorigenesis through MYC Stabilization
Structural Basis for the High-Affinity Interaction between CASK and Mint1
GeneCT: a generalizable cancerous status and tissue origin classifier for pan-cancer biopsies
Genetic landscape of ultra-stable chronic lymphocytic leukemia patients
Mutational Landscape of Secondary Glioblastoma Guides MET-Targeted Trial in Brain Tumor
Pharmacogenomic landscape of patient-derived tumor cells informs precision oncology therapy
Clinical Impact of Small TP53 Mutated Subclones in Chronic Lymphocytic Leukemia
Noncoding RNA Transcription Targets AID to Divergently Transcribed Loci in B Cells
PU.1 is essential for MLL leukemia partially via crosstalk with the MEIS/HOX pathway
Tumor evolutionary directed graphs and the history of chronic lymphocytic leukemia
Disease-Aging Network Reveals Significant Roles of Aging Genes in Connecting Genetic Diseases
Modularity optimization in community detection of complex networks
GeneCT: a generalizable cancerous status and tissue origin classifier for pan-cancer biopsies
Article
Genetic landscape of ultra-stable chronic lymphocytic leukemia patients
Article
Article
Mutational Landscape of Secondary Glioblastoma Guides MET-Targeted Trial in Brain Tumor
Article
Pharmacogenomic landscape of patient-derived tumor cells informs precision oncology therapy
Article
Article
Article
Article
Repurposing Dasatinib for Ibrutinib-Resistant Diffuse Large B-Cell Lymphoma
Article
RNA Exosome Complex-Mediated Control of Redox Status in Pluripotent Stem Cells
Article
Spatiotemporal Genomic Architecture Informs Precision Oncology in Glioblastoma
Article
Clonal evolution of glioblastoma under therapy
Article
Article
Article
Article
Network Propagation Reveals Novel Features Predicting Drug Response of Cancer Cell Lines
Article
Network stratification analysis for identifying function-specific network layers
Article
Article
Article
RNA exosome-regulated long non-coding RNA transcription controls super-enhancer activity
Article
Transcriptomics identify CD9 as a marker of murine IL10-competent regulatory B cells
Article
Clinical Impact of Small TP53 Mutated Subclones in Chronic Lymphocytic Leukemia
Article
Noncoding RNA Transcription Targets AID to Divergently Transcribed Loci in B Cells
Article
PU.1 is essential for MLL leukemia partially via crosstalk with the MEIS/HOX pathway
Article
Tumor evolutionary directed graphs and the history of chronic lymphocytic leukemia
Article
Article
Article
E3-ubiquitin Ligase Nedd4 Determines the Fate of AID-associated RNA Polymerase II in B cells
Article
Genetic Lesions Associated with Chronic Lymphocytic Leukemia Transformation to Richter Syndrome
Article
NOA: A cytoscape plugin for network ontology analysis
Article
Whole-exome Sequencing Reveals Recurrent Somatic Mutation Networks In Cancer
Article
A unified computational model for revealing and predicting subtle subtypes of cancers
Article
Inferring a protein interaction map of Mycobacterium tuberculosis based on sequences and interologs
Article
Rewiring drug-activated p53-regulatory network from suppressing to promoting tumorigenesis
Article
Article
Conference paper
Network screening of Goto-Kakizaki rat liver microarray data during diabetic progression
Article
NOA: a novel Network Ontology Analysis method
Article
A Regularized Optimization Model for Community Identification in Complex Networks
Conference paper
A SVC-based Method to Detect Multi-scalar Noisy Communities in Complex Networks
Conference paper
Multiple Resolution Community Structure Analysis
Conference paper
Sequence-based protein-protein interaction prediction via support vector machine
Article
Uncover the Transient Transcriptional Regulations by a Novel Sliding Window Correlation Strategy
Conference paper
Disease-Aging Network Reveals Significant Roles of Aging Genes in Connecting Genetic Diseases
Article
Modularity optimization in community detection of complex networks
Article
A Constrained Optimization Method for Community Detection
Conference paper
Align Protein Surface Structures to Identify Evolutionally and Structurally Conserved Residues
Conference paper
Analysis of Transcriptome of Rice Anther
Conference paper
Gene Prioritization for Type 2 Diabetes in Tissue-specific Protein Interaction Networks
Conference paper
Recognition of Structure Similarities in Proteins
Article
Remarks on network community properties
Article
BEHI5001 | Data Science in Bioengineering |
SCIE3500 | IRE Research Project I |
SCIE4500 | IRE Research Project II |
UROP1100N | Undergraduate Research Opportunities Series 1 |
UROP1000 | Undergraduate Research Opportunities |
BIEN3320 | Data Science for Biology and Medicine |
LIFS4320 | Data Science for Biology and Medicine |
LIFS4981 | Biochemistry and Cell Biology Project Research II |
LIFS6116G | Current Topics in Genomics and Bioinformatics |
BEHI5001 | Data Science in Bioengineering |
LIFS4971 | Biochemistry and Cell Biology Project Research I |
LIFS6111S | Life Science Postgraduate Student Seminar |
No Teaching Assignments |
No Teaching Assignments |
LIU, Xuyi
Life Science
QIAO, Yimeng
Bioengineering
WANG, Haoyu
Life Science
WANG, Minghao
Bioengineering
XIONG, Kewei
Life Science
YANG, Mengqi
Life Science
HUANG, Zhi
Bioengineering
LI, Jiabao
Life Science
LIU, Ran
Life Science
RUAN, Yuyan
Bioengineering
YAN, Mengli
Life Science
YANG, Zhiyong
Life Science
ZHANG, Xiaomeng
Individualized Interdisciplinary Program (Data Science and Analytics)
HUANG, Ying
Life Science
TANG, Jihong
Life Science
MO, Zongchao
Life Science
AN, Qi
Life Science
LEE, Jooran
Life Science
SONG, Dong
Life Science( Completed in 2024 )
DENG, Mingxi
(co-supervision)
Life Science( Completed in 2023 )
YANG, Yingxi
Bioengineering( Completed in 2023 )
NAM, Yoonhee
Life Science( Completed in 2022 )
YUAN, Congmin
Bioengineering( Completed in 2022 )
CHEN, Yiyun
Life Science( Completed in 2021 )
MA, Ruochen
Life Science( Completed in 2023 )
HUANG, Hanli
Bioengineering( Completed in 2022 )
LI, Jiabao
Life Science( Completed in 2022 )
ZHU, Zhihan
Bioengineering( Completed in 2022 )
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